GenBank Feature Extractor

Extract sequence features from GenBank files including introns, exons, and coding sequences

Tool Configuration
Configure the parameters for GenBank Feature Extractor

Paste the contents of one or more GenBank files. Input limit is 1,000,000,000 characters.

1

Prepare Your GenBank File

Paste GenBank format file contents with feature annotations (CDS, mRNA, exons, etc.).

2

Select Output Format

Choose "Separated" to extract features only, or "Uppercased" to highlight features in context.

3

Execute Extraction

Click "Execute Tool" to extract all annotated features from the GenBank file.

4

Download Features

Download extracted feature sequences for downstream analysis, such as cDNA construction or motif analysis.

Use Cases
Common applications for the GenBank Feature Extractor tool

Extract cDNA from Genomic DNA

Derive cDNA sequences from genomic sequences by extracting and joining exons while removing introns.

Coding Sequence Extraction

Extract CDS features for protein coding analysis or expression studies.

Feature Visualization

Highlight specific features within the full sequence context using uppercase formatting.

Regulatory Element Analysis

Extract promoters, enhancers, and other regulatory sequences for further analysis.